Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smchd1Q6P5D8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Gm26083-201ENSMUST00000157904 193 ntBASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Gm44364-201ENSMUST00000198368 141 ntBASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Gm9368-201ENSMUST00000219348 831 ntBASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smchd1Q6P5D8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Gm11964-201ENSMUST00000120982 444 ntBASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smchd1Q6P5D8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smchd1Q6P5D8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms