Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Mir1897-201ENSMUST00000122581 272 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm18889-201ENSMUST00000174284 929 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Krt42Q6IFX2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm19931-201ENSMUST00000198920 368 ntBASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt42Q6IFX2 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.46□□□□□ -0.26
Krt42Q6IFX2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Krt42Q6IFX2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Krt42Q6IFX2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Krt42Q6IFX2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Krt42Q6IFX2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Gm24543-201ENSMUST00000103867 82 ntBASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Gm12260-201ENSMUST00000122447 411 ntBASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.45□□□□□ -0.26
Krt42Q6IFX2 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.45□□□□□ -0.26
Krt42Q6IFX2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms