Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Gm23119-201ENSMUST00000158610 140 ntBASIC15.54■□□□□ 0.08
Col11a2Q64739 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.54■□□□□ 0.08
Col11a2Q64739 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.54■□□□□ 0.08
Col11a2Q64739 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col11a2Q64739 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.54■□□□□ 0.08
Col11a2Q64739 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Gm4482-201ENSMUST00000200876 742 ntBASIC15.54■□□□□ 0.08
Col11a2Q64739 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Gm9785-201ENSMUST00000062642 1006 ntBASIC15.54■□□□□ 0.08
Col11a2Q64739 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col11a2Q64739 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col11a2Q64739 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm12899-201ENSMUST00000120565 551 ntBASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm10774-201ENSMUST00000188689 204 ntBASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.53■□□□□ 0.08
Col11a2Q64739 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Col11a2Q64739 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.53■□□□□ 0.08
Col11a2Q64739 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.53■□□□□ 0.08
Col11a2Q64739 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col11a2Q64739 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col11a2Q64739 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm15703-201ENSMUST00000120250 880 ntBASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm11246-201ENSMUST00000120880 345 ntBASIC15.52■□□□□ 0.08
Col11a2Q64739 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm22138-201ENSMUST00000158748 128 ntBASIC15.52■□□□□ 0.08
Col11a2Q64739 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.52■□□□□ 0.08
Col11a2Q64739 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.52■□□□□ 0.08
Col11a2Q64739 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col11a2Q64739 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a2Q64739 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Col11a2Q64739 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a2Q64739 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a2Q64739 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Col11a2Q64739 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col11a2Q64739 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms