Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CishQ62225 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CishQ62225 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CishQ62225 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CishQ62225 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CishQ62225 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CishQ62225 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Gm13369-201ENSMUST00000119442 987 ntBASIC12.54□□□□□ -0.4
CishQ62225 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.54□□□□□ -0.4
CishQ62225 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Gm29127-201ENSMUST00000188304 517 ntBASIC12.54□□□□□ -0.4
CishQ62225 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Gm37497-201ENSMUST00000195830 798 ntBASIC12.54□□□□□ -0.4
CishQ62225 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Gm6458-201ENSMUST00000211573 635 ntBASIC12.54□□□□□ -0.4
CishQ62225 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.54□□□□□ -0.4
CishQ62225 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.54□□□□□ -0.4
CishQ62225 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.54□□□□□ -0.4
CishQ62225 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
CishQ62225 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CishQ62225 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CishQ62225 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Gm13123-201ENSMUST00000122173 492 ntBASIC12.53□□□□□ -0.4
CishQ62225 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.53□□□□□ -0.4
CishQ62225 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.53□□□□□ -0.4
CishQ62225 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CishQ62225 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.53□□□□□ -0.4
CishQ62225 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.53□□□□□ -0.4
CishQ62225 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.53□□□□□ -0.4
CishQ62225 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.53□□□□□ -0.4
CishQ62225 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.53□□□□□ -0.4
CishQ62225 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.53□□□□□ -0.4
CishQ62225 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.53□□□□□ -0.4
CishQ62225 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.53□□□□□ -0.4
CishQ62225 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CishQ62225 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CishQ62225 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
CishQ62225 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CishQ62225 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CishQ62225 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CishQ62225 Grk6-205ENSMUST00000224653 2976 ntBASIC12.52□□□□□ -0.4
CishQ62225 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CishQ62225 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CishQ62225 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.52□□□□□ -0.41
CishQ62225 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CishQ62225 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CishQ62225 Gm4271-201ENSMUST00000174444 973 ntBASIC12.52□□□□□ -0.41
CishQ62225 Gm28693-202ENSMUST00000190758 331 ntBASIC12.52□□□□□ -0.41
CishQ62225 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CishQ62225 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.52□□□□□ -0.41
CishQ62225 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms