Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Mir1895-201ENSMUST00000122615 79 ntBASIC12.31□□□□□ -0.44
Sox17Q61473 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox17Q61473 Gm9229-201ENSMUST00000222777 126 ntBASIC12.31□□□□□ -0.44
Sox17Q61473 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.31□□□□□ -0.44
Sox17Q61473 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox17Q61473 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox17Q61473 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox17Q61473 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.31□□□□□ -0.44
Sox17Q61473 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.3□□□□□ -0.44
Sox17Q61473 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox17Q61473 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox17Q61473 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.3□□□□□ -0.44
Sox17Q61473 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Sox17Q61473 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox17Q61473 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Gm15393-201ENSMUST00000120499 219 ntBASIC12.3□□□□□ -0.44
Sox17Q61473 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.3□□□□□ -0.44
Sox17Q61473 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sox17Q61473 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox17Q61473 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox17Q61473 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox17Q61473 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox17Q61473 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox17Q61473 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox17Q61473 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
Sox17Q61473 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox17Q61473 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Gm22065-201ENSMUST00000103753 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm22066-201ENSMUST00000103761 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm24932-201ENSMUST00000103763 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm24115-201ENSMUST00000103799 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm22190-201ENSMUST00000103827 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm22191-201ENSMUST00000103831 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm24721-201ENSMUST00000103849 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm28018-201ENSMUST00000103869 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Gm26399-201ENSMUST00000103937 110 ntBASIC12.29□□□□□ -0.44
Sox17Q61473 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Sox17Q61473 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox17Q61473 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox17Q61473 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms