Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm13123-201ENSMUST00000122173 492 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm3961-201ENSMUST00000204425 994 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm9823-201ENSMUST00000051212 327 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm10146-201ENSMUST00000072739 309 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shroom1Q5SX79 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm2231-201ENSMUST00000125661 612 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm16379-201ENSMUST00000161469 348 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm25927-201ENSMUST00000175058 117 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm8762-201ENSMUST00000193486 339 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm43133-201ENSMUST00000197472 463 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm18041-201ENSMUST00000218210 618 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.98□□□□□ -0.17
Shroom1Q5SX79 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shroom1Q5SX79 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms