Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Upf3bQ3ULL6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3bQ3ULL6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3bQ3ULL6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3bQ3ULL6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.08□□□□□ -0.15
Upf3bQ3ULL6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Upf3bQ3ULL6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm16202-201ENSMUST00000117532 544 ntBASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm44069-201ENSMUST00000204898 506 ntBASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm8598-201ENSMUST00000221184 836 ntBASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm10012-201ENSMUST00000078252 192 ntBASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Upf3bQ3ULL6 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Gm10156-201ENSMUST00000122364 462 ntBASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Proscos-202ENSMUST00000178990 666 ntBASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upf3bQ3ULL6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Gm8213-201ENSMUST00000118191 441 ntBASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.06□□□□□ -0.16
Upf3bQ3ULL6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms