Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Q3U1D9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Q3U1D9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.42□□□□□ -0.58
Q3U1D9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.42□□□□□ -0.58
Q3U1D9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.42□□□□□ -0.58
Q3U1D9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.42□□□□□ -0.58
Q3U1D9 Gm4768-201ENSMUST00000206199 686 ntBASIC11.42□□□□□ -0.58
Q3U1D9 Gm19163-201ENSMUST00000223313 780 ntBASIC11.42□□□□□ -0.58
Q3U1D9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U1D9 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.42□□□□□ -0.58
Q3U1D9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Q3U1D9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Q3U1D9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Mir1247-201ENSMUST00000116706 82 ntBASIC11.41□□□□□ -0.58
Q3U1D9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.41□□□□□ -0.58
Q3U1D9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.41□□□□□ -0.58
Q3U1D9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.41□□□□□ -0.58
Q3U1D9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Gm38266-201ENSMUST00000194931 421 ntBASIC11.41□□□□□ -0.58
Q3U1D9 Gm43133-201ENSMUST00000197472 463 ntBASIC11.41□□□□□ -0.58
Q3U1D9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.41□□□□□ -0.58
Q3U1D9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.41□□□□□ -0.58
Q3U1D9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.41□□□□□ -0.58
Q3U1D9 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.41□□□□□ -0.58
Q3U1D9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Q3U1D9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.41□□□□□ -0.58
Q3U1D9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.41□□□□□ -0.58
Q3U1D9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.41□□□□□ -0.58
Q3U1D9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.41□□□□□ -0.58
Q3U1D9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Q3U1D9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Q3U1D9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.4□□□□□ -0.58
Q3U1D9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Q3U1D9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.4□□□□□ -0.58
Q3U1D9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms