Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cul4aQ3TCH7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Gm12151-201ENSMUST00000121374 290 ntBASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Gm11978-201ENSMUST00000122315 466 ntBASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Gm5354-201ENSMUST00000182417 973 ntBASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cul4aQ3TCH7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Mir6956-201ENSMUST00000183598 62 ntBASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Mir8102-201ENSMUST00000184148 139 ntBASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cul4aQ3TCH7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Gm38223-201ENSMUST00000194484 695 ntBASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.79□□□□□ -0.2
Cul4aQ3TCH7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cul4aQ3TCH7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms