Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.63□□□□□ -0.71
Sssca1P56873 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.63□□□□□ -0.71
Sssca1P56873 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.63□□□□□ -0.71
Sssca1P56873 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm14822-201ENSMUST00000122247 291 ntBASIC10.63□□□□□ -0.71
Sssca1P56873 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.63□□□□□ -0.71
Sssca1P56873 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.63□□□□□ -0.71
Sssca1P56873 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm17330-201ENSMUST00000221047 165 ntBASIC10.63□□□□□ -0.71
Sssca1P56873 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sssca1P56873 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sssca1P56873 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.63□□□□□ -0.71
Sssca1P56873 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Sssca1P56873 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sssca1P56873 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.62□□□□□ -0.71
Sssca1P56873 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Sssca1P56873 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Gm15240-201ENSMUST00000118156 720 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Sssca1P56873 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Gm27430-201ENSMUST00000184585 107 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.62□□□□□ -0.71
Sssca1P56873 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.62□□□□□ -0.71
Sssca1P56873 Gm44333-201ENSMUST00000197168 107 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Gm19931-201ENSMUST00000198920 368 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Gm44344-201ENSMUST00000200287 129 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.62□□□□□ -0.71
Sssca1P56873 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.62□□□□□ -0.71
Sssca1P56873 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.62□□□□□ -0.71
Sssca1P56873 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.62□□□□□ -0.71
Sssca1P56873 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sssca1P56873 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.62□□□□□ -0.71
Sssca1P56873 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Sssca1P56873 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sssca1P56873 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.61□□□□□ -0.71
Sssca1P56873 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sssca1P56873 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sssca1P56873 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms