Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CtskP55097 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CtskP55097 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CtskP55097 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CtskP55097 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.95□□□□□ -0.34
CtskP55097 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.95□□□□□ -0.34
CtskP55097 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CtskP55097 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CtskP55097 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CtskP55097 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CtskP55097 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.94□□□□□ -0.34
CtskP55097 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.94□□□□□ -0.34
CtskP55097 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CtskP55097 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.94□□□□□ -0.34
CtskP55097 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 Gm27682-201ENSMUST00000183930 110 ntBASIC12.94□□□□□ -0.34
CtskP55097 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.94□□□□□ -0.34
CtskP55097 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.94□□□□□ -0.34
CtskP55097 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Gm6013-201ENSMUST00000212264 699 ntBASIC12.94□□□□□ -0.34
CtskP55097 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.94□□□□□ -0.34
CtskP55097 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.94□□□□□ -0.34
CtskP55097 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.94□□□□□ -0.34
CtskP55097 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.94□□□□□ -0.34
CtskP55097 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.94□□□□□ -0.34
CtskP55097 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.94□□□□□ -0.34
CtskP55097 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.94□□□□□ -0.34
CtskP55097 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CtskP55097 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CtskP55097 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.93□□□□□ -0.34
CtskP55097 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.93□□□□□ -0.34
CtskP55097 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Gm1335-201ENSMUST00000121653 386 ntBASIC12.93□□□□□ -0.34
CtskP55097 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.93□□□□□ -0.34
CtskP55097 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.93□□□□□ -0.34
CtskP55097 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.93□□□□□ -0.34
CtskP55097 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CtskP55097 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
CtskP55097 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CtskP55097 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CtskP55097 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CtskP55097 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CtskP55097 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms