Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.47□□□□□ -0.09
Brca1P48754 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Brca1P48754 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.47□□□□□ -0.09
Brca1P48754 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.47□□□□□ -0.09
Brca1P48754 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Gm23949-201ENSMUST00000104027 127 ntBASIC14.47□□□□□ -0.09
Brca1P48754 Gm15703-201ENSMUST00000120250 880 ntBASIC14.47□□□□□ -0.09
Brca1P48754 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Gm45598-202ENSMUST00000210719 986 ntBASIC14.47□□□□□ -0.09
Brca1P48754 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.47□□□□□ -0.09
Brca1P48754 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Brca1P48754 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Brca1P48754 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.46□□□□□ -0.09
Brca1P48754 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.46□□□□□ -0.09
Brca1P48754 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.46□□□□□ -0.09
Brca1P48754 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.46□□□□□ -0.09
Brca1P48754 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.46□□□□□ -0.09
Brca1P48754 Gm19287-201ENSMUST00000203190 358 ntBASIC14.46□□□□□ -0.09
Brca1P48754 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.46□□□□□ -0.09
Brca1P48754 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Brca1P48754 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Brca1P48754 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
Brca1P48754 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Brca1P48754 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.46□□□□□ -0.09
Brca1P48754 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.46□□□□□ -0.09
Brca1P48754 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Brca1P48754 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Brca1P48754 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brca1P48754 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Brca1P48754 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Brca1P48754 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Mir874-201ENSMUST00000104769 76 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.45□□□□□ -0.1
Brca1P48754 Gm12165-201ENSMUST00000117047 342 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm12795-201ENSMUST00000117594 539 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm14999-201ENSMUST00000121039 624 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.45□□□□□ -0.1
Brca1P48754 Gm5616-201ENSMUST00000165252 384 ntBASIC14.45□□□□□ -0.1
Brca1P48754 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm8741-201ENSMUST00000174736 384 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Gm42937-201ENSMUST00000197360 752 ntBASIC14.45□□□□□ -0.1
Brca1P48754 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Brca1P48754 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Brca1P48754 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Brca1P48754 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Brca1P48754 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms