Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HmgclP38060 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.96□□□□□ -0.34
HmgclP38060 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.96□□□□□ -0.34
HmgclP38060 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HmgclP38060 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.96□□□□□ -0.34
HmgclP38060 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.96□□□□□ -0.34
HmgclP38060 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HmgclP38060 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
HmgclP38060 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HmgclP38060 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.95□□□□□ -0.34
HmgclP38060 Gm11618-201ENSMUST00000117946 267 ntBASIC12.95□□□□□ -0.34
HmgclP38060 Gm11814-201ENSMUST00000119515 929 ntBASIC12.95□□□□□ -0.34
HmgclP38060 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
HmgclP38060 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.95□□□□□ -0.34
HmgclP38060 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.95□□□□□ -0.34
HmgclP38060 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.95□□□□□ -0.34
HmgclP38060 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.95□□□□□ -0.34
HmgclP38060 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HmgclP38060 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.94□□□□□ -0.34
HmgclP38060 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HmgclP38060 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HmgclP38060 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.94□□□□□ -0.34
HmgclP38060 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Gm11803-201ENSMUST00000119966 444 ntBASIC12.94□□□□□ -0.34
HmgclP38060 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.94□□□□□ -0.34
HmgclP38060 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.94□□□□□ -0.34
HmgclP38060 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.94□□□□□ -0.34
HmgclP38060 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.94□□□□□ -0.34
HmgclP38060 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Gm7653-201ENSMUST00000214567 508 ntBASIC12.94□□□□□ -0.34
HmgclP38060 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HmgclP38060 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HmgclP38060 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms