Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Mir874-201ENSMUST00000104769 76 ntBASIC11.93□□□□□ -0.5
VtnP29788 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Gm27847-201ENSMUST00000183711 107 ntBASIC11.93□□□□□ -0.5
VtnP29788 Gm27375-201ENSMUST00000183799 107 ntBASIC11.93□□□□□ -0.5
VtnP29788 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.93□□□□□ -0.5
VtnP29788 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.93□□□□□ -0.5
VtnP29788 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.93□□□□□ -0.5
VtnP29788 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
VtnP29788 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.93□□□□□ -0.5
VtnP29788 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VtnP29788 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.92□□□□□ -0.5
VtnP29788 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VtnP29788 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
VtnP29788 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Gm13612-201ENSMUST00000119276 390 ntBASIC11.92□□□□□ -0.5
VtnP29788 Gm14660-201ENSMUST00000119809 575 ntBASIC11.92□□□□□ -0.5
VtnP29788 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
VtnP29788 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Gm45784-201ENSMUST00000188360 142 ntBASIC11.92□□□□□ -0.5
VtnP29788 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.92□□□□□ -0.5
VtnP29788 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.92□□□□□ -0.5
VtnP29788 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.92□□□□□ -0.5
VtnP29788 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.92□□□□□ -0.5
VtnP29788 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.92□□□□□ -0.5
VtnP29788 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.92□□□□□ -0.5
VtnP29788 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.92□□□□□ -0.5
VtnP29788 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.92□□□□□ -0.5
VtnP29788 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VtnP29788 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.91□□□□□ -0.5
VtnP29788 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
VtnP29788 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.91□□□□□ -0.5
VtnP29788 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VtnP29788 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.91□□□□□ -0.5
VtnP29788 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
VtnP29788 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Gm13392-201ENSMUST00000117708 150 ntBASIC11.91□□□□□ -0.5
VtnP29788 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.91□□□□□ -0.5
VtnP29788 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VtnP29788 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms