Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
BdnfP21237 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Gm27989-201ENSMUST00000184721 107 ntBASIC12.64□□□□□ -0.39
BdnfP21237 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
BdnfP21237 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
BdnfP21237 Gm5425-201ENSMUST00000214125 459 ntBASIC12.64□□□□□ -0.39
BdnfP21237 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.64□□□□□ -0.39
BdnfP21237 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.64□□□□□ -0.39
BdnfP21237 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.63□□□□□ -0.39
BdnfP21237 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.63□□□□□ -0.39
BdnfP21237 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.63□□□□□ -0.39
BdnfP21237 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.63□□□□□ -0.39
BdnfP21237 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BdnfP21237 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
BdnfP21237 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
BdnfP21237 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
BdnfP21237 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.63□□□□□ -0.39
BdnfP21237 Gm9522-201ENSMUST00000182394 926 ntBASIC12.63□□□□□ -0.39
BdnfP21237 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.63□□□□□ -0.39
BdnfP21237 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Gm17795-201ENSMUST00000214505 757 ntBASIC12.63□□□□□ -0.39
BdnfP21237 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Gm5867-201ENSMUST00000063197 592 ntBASIC12.63□□□□□ -0.39
BdnfP21237 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BdnfP21237 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BdnfP21237 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
BdnfP21237 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.63□□□□□ -0.39
BdnfP21237 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BdnfP21237 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
BdnfP21237 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Mir874-201ENSMUST00000104769 76 ntBASIC12.62□□□□□ -0.39
BdnfP21237 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.62□□□□□ -0.39
BdnfP21237 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Gm27306-201ENSMUST00000183970 107 ntBASIC12.62□□□□□ -0.39
BdnfP21237 Mir7221-201ENSMUST00000184009 72 ntBASIC12.62□□□□□ -0.39
BdnfP21237 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.62□□□□□ -0.39
BdnfP21237 Gm18905-201ENSMUST00000205454 928 ntBASIC12.62□□□□□ -0.39
BdnfP21237 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.62□□□□□ -0.39
BdnfP21237 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BdnfP21237 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
BdnfP21237 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms