Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.57□□□□□ -0.56
Ccl3P10855 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccl3P10855 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccl3P10855 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Ccl3P10855 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccl3P10855 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccl3P10855 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccl3P10855 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccl3P10855 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Gm11930-201ENSMUST00000117788 190 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Gm14130-201ENSMUST00000118417 987 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Gm13492-201ENSMUST00000119772 665 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ccl3P10855 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.56□□□□□ -0.56
Ccl3P10855 AA914427-201ENSMUST00000193194 1166 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccl3P10855 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccl3P10855 Gm22058-201ENSMUST00000083393 310 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ccl3P10855 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.56□□□□□ -0.56
Ccl3P10855 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccl3P10855 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.56□□□□□ -0.56
Ccl3P10855 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccl3P10855 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccl3P10855 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccl3P10855 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.55□□□□□ -0.56
Ccl3P10855 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Gm14277-201ENSMUST00000121195 360 ntBASIC11.55□□□□□ -0.56
Ccl3P10855 Gm15547-201ENSMUST00000122152 333 ntBASIC11.55□□□□□ -0.56
Ccl3P10855 Gm13570-201ENSMUST00000140763 309 ntBASIC11.55□□□□□ -0.56
Ccl3P10855 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccl3P10855 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccl3P10855 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Ccl3P10855 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms