Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp6P0C0A3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Chmp6P0C0A3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.33□□□□□ -0.12
Chmp6P0C0A3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Chmp6P0C0A3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm15806-201ENSMUST00000120696 955 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Gm26315-201ENSMUST00000083890 321 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp6P0C0A3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.32□□□□□ -0.12
Chmp6P0C0A3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Chmp6P0C0A3 Gm9002-201ENSMUST00000178437 499 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms