Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm11930-201ENSMUST00000117788 190 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm23363-201ENSMUST00000175024 79 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 AA914427-201ENSMUST00000193194 1166 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm3786-201ENSMUST00000202659 378 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Gm22058-201ENSMUST00000083393 310 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.42□□□□□ -0.1
Trdmt1O55055 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdmt1O55055 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.42□□□□□ -0.1
Trdmt1O55055 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.41□□□□□ -0.1
Trdmt1O55055 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.41□□□□□ -0.1
Trdmt1O55055 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
Trdmt1O55055 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.41□□□□□ -0.1
Trdmt1O55055 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trdmt1O55055 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm2260-201ENSMUST00000184965 657 ntBASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm18212-201ENSMUST00000211678 889 ntBASIC14.41□□□□□ -0.1
Trdmt1O55055 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.41□□□□□ -0.1
Trdmt1O55055 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.41□□□□□ -0.1
Trdmt1O55055 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.41□□□□□ -0.1
Trdmt1O55055 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trdmt1O55055 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdmt1O55055 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.41□□□□□ -0.1
Trdmt1O55055 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdmt1O55055 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdmt1O55055 Gm13570-201ENSMUST00000140763 309 ntBASIC14.4□□□□□ -0.1
Trdmt1O55055 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms