Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim55G3X8Y1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.48□□□□□ -0.25
Trim55G3X8Y1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim55G3X8Y1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.46□□□□□ -0.25
Trim55G3X8Y1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim55G3X8Y1 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms