Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Mir686-201ENSMUST00000102174 109 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm11222-201ENSMUST00000119005 738 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm13369-201ENSMUST00000119442 987 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm25951-201ENSMUST00000175330 64 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm2445-201ENSMUST00000182798 989 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syngap1F6SEU4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Syngap1F6SEU4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Gm11964-201ENSMUST00000120982 444 ntBASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Gm16397-201ENSMUST00000122201 494 ntBASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Gm20426-201ENSMUST00000173657 440 ntBASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Syngap1F6SEU4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm27023-201ENSMUST00000182372 285 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm37922-201ENSMUST00000195596 455 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm10752-201ENSMUST00000218348 729 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms