Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Gm5745-201ENSMUST00000183748 313 ntBASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Gm27486-201ENSMUST00000184923 80 ntBASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cpsf4lE9Q2N0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cpsf4lE9Q2N0 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms