Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm28043E0CXC2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Pck2-205ENSMUST00000226352 2784 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm28043E0CXC2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm28043E0CXC2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms