Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm10179-201ENSMUST00000086233 688 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm9062-201ENSMUST00000117712 727 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm15711-201ENSMUST00000118889 535 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm29615-201ENSMUST00000185371 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28224-201ENSMUST00000186078 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm29001-201ENSMUST00000186177 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28292-201ENSMUST00000186593 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28101-201ENSMUST00000187608 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm29076-201ENSMUST00000187689 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28302-201ENSMUST00000187931 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28646-201ENSMUST00000188220 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28205-201ENSMUST00000189177 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm29032-201ENSMUST00000189797 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm28695-201ENSMUST00000190300 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm37448-201ENSMUST00000192795 697 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col4a6B1AVK5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm9230-201ENSMUST00000188228 532 ntBASIC13.22□□□□□ -0.29
Col4a6B1AVK5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms