Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SrfQ9JM73 Gm37986-201ENSMUST00000193285 383 ntBASIC12.44□□□□□ -0.42
SrfQ9JM73 Gm43452-201ENSMUST00000201873 991 ntBASIC12.44□□□□□ -0.42
SrfQ9JM73 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Gm5950-201ENSMUST00000213337 772 ntBASIC12.44□□□□□ -0.42
SrfQ9JM73 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.44□□□□□ -0.42
SrfQ9JM73 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.44□□□□□ -0.42
SrfQ9JM73 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SrfQ9JM73 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SrfQ9JM73 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.44□□□□□ -0.42
SrfQ9JM73 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.44□□□□□ -0.42
SrfQ9JM73 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.44□□□□□ -0.42
SrfQ9JM73 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SrfQ9JM73 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.43□□□□□ -0.42
SrfQ9JM73 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.43□□□□□ -0.42
SrfQ9JM73 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm38018-201ENSMUST00000195651 540 ntBASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.43□□□□□ -0.42
SrfQ9JM73 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.43□□□□□ -0.42
SrfQ9JM73 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
SrfQ9JM73 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SrfQ9JM73 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.42□□□□□ -0.42
SrfQ9JM73 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.42□□□□□ -0.42
SrfQ9JM73 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.42□□□□□ -0.42
SrfQ9JM73 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SrfQ9JM73 Gm14028-201ENSMUST00000117434 479 ntBASIC12.42□□□□□ -0.42
SrfQ9JM73 Gm14277-201ENSMUST00000121195 360 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms