Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim39Q9ESN2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim39Q9ESN2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Gm25925-201ENSMUST00000158314 306 ntBASIC12.35□□□□□ -0.43
Trim39Q9ESN2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim39Q9ESN2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms