Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Khdc3Q9CWU5 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.65□□□□□ -0.39
Khdc3Q9CWU5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Khdc3Q9CWU5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Khdc3Q9CWU5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Mir874-201ENSMUST00000104769 76 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Mir7654-201ENSMUST00000185082 70 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gm45841-201ENSMUST00000207700 164 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gm18041-201ENSMUST00000218210 618 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gm15823-201ENSMUST00000064305 670 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gm26315-201ENSMUST00000083890 321 ntBASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Khdc3Q9CWU5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Rubie-203ENSMUST00000227803 2430 ntBASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms