Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm45224-201ENSMUST00000208203 414 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Gm8913-201ENSMUST00000209491 641 ntBASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cldnd1Q9CQX5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cldnd1Q9CQX5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gm45433-201ENSMUST00000209386 247 ntBASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cldnd1Q9CQX5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cldnd1Q9CQX5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms