Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col25a1Q99MQ5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm11930-201ENSMUST00000117788 190 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm25700-201ENSMUST00000177693 110 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm9358-201ENSMUST00000183067 927 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm5621-201ENSMUST00000187303 640 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col25a1Q99MQ5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gm43778-201ENSMUST00000199438 199 ntBASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gm7848-201ENSMUST00000210739 718 ntBASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.62□□□□□ -0.23
Col25a1Q99MQ5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms