Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm12138-201ENSMUST00000122180 951 ntBASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm45384-201ENSMUST00000210451 277 ntBASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.29□□□□□ -0.28
Clip4Q8CI96 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clip4Q8CI96 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Gm11918-201ENSMUST00000121660 179 ntBASIC13.28□□□□□ -0.28
Clip4Q8CI96 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Gm5186-201ENSMUST00000218781 920 ntBASIC13.28□□□□□ -0.28
Clip4Q8CI96 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.28□□□□□ -0.28
Clip4Q8CI96 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.28□□□□□ -0.28
Clip4Q8CI96 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.28□□□□□ -0.28
Clip4Q8CI96 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clip4Q8CI96 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clip4Q8CI96 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.27□□□□□ -0.29
Clip4Q8CI96 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.27□□□□□ -0.29
Clip4Q8CI96 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.27□□□□□ -0.29
Clip4Q8CI96 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.27□□□□□ -0.29
Clip4Q8CI96 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.27□□□□□ -0.29
Clip4Q8CI96 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clip4Q8CI96 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Clip4Q8CI96 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms