Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa4Q8CA71 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Gm5370-201ENSMUST00000187187 574 ntBASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa4Q8CA71 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Gm17208-201ENSMUST00000168388 535 ntBASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Gm4857-201ENSMUST00000192718 785 ntBASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa4Q8CA71 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.21■□□□□ 0.03
Shisa4Q8CA71 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Gm25927-201ENSMUST00000175058 117 ntBASIC15.21■□□□□ 0.03
Shisa4Q8CA71 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Gm18041-201ENSMUST00000218210 618 ntBASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.21■□□□□ 0.03
Shisa4Q8CA71 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shisa4Q8CA71 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms