Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim9Q8C7M3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gm11918-201ENSMUST00000121660 179 ntBASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim9Q8C7M3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Gm12138-201ENSMUST00000122180 951 ntBASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim9Q8C7M3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim9Q8C7M3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms