Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Gm16372-201ENSMUST00000073088 450 ntBASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.33□□□□□ -0.27
Usp43Q8BUM9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Usp43Q8BUM9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Usp43Q8BUM9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.33□□□□□ -0.27
Usp43Q8BUM9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Usp43Q8BUM9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Usp43Q8BUM9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Gm8598-201ENSMUST00000221184 836 ntBASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Usp43Q8BUM9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Gm9794-201ENSMUST00000202370 423 ntBASIC13.32□□□□□ -0.28
Usp43Q8BUM9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp43Q8BUM9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms