Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp54Q8BL06 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Gm19353-201ENSMUST00000184561 445 ntBASIC18.37■□□□□ 0.53
Usp54Q8BL06 Gm45118-201ENSMUST00000208928 825 ntBASIC18.37■□□□□ 0.53
Usp54Q8BL06 AC138604.1-201ENSMUST00000226969 739 ntBASIC18.37■□□□□ 0.53
Usp54Q8BL06 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Gm10076-201ENSMUST00000073238 384 ntBASIC18.37■□□□□ 0.53
Usp54Q8BL06 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp54Q8BL06 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Gm9211-201ENSMUST00000182882 975 ntBASIC18.36■□□□□ 0.53
Usp54Q8BL06 Gm37835-201ENSMUST00000193305 361 ntBASIC18.36■□□□□ 0.53
Usp54Q8BL06 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.36■□□□□ 0.53
Usp54Q8BL06 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp54Q8BL06 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.36■□□□□ 0.53
Usp54Q8BL06 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Gm15782-201ENSMUST00000121073 445 ntBASIC18.35■□□□□ 0.53
Usp54Q8BL06 Gm23119-201ENSMUST00000158610 140 ntBASIC18.35■□□□□ 0.53
Usp54Q8BL06 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Aprt-ps-201ENSMUST00000212311 505 ntBASIC18.35■□□□□ 0.53
Usp54Q8BL06 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.35■□□□□ 0.53
Usp54Q8BL06 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.35■□□□□ 0.53
Usp54Q8BL06 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp54Q8BL06 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gm14644-201ENSMUST00000116671 647 ntBASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gm13408-201ENSMUST00000119822 798 ntBASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gm13935-201ENSMUST00000121859 798 ntBASIC18.34■□□□□ 0.53
Usp54Q8BL06 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gm43962-201ENSMUST00000203898 190 ntBASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp54Q8BL06 AY036118-201ENSMUST00000200021 923 ntBASIC18.34■□□□□ 0.53
Usp54Q8BL06 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms