Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Gm42660-201ENSMUST00000197733 947 ntBASIC14.16□□□□□ -0.14
Nop53Q8BK35 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Gm5186-201ENSMUST00000218781 920 ntBASIC14.16□□□□□ -0.14
Nop53Q8BK35 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.16□□□□□ -0.14
Nop53Q8BK35 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Syt7-205ENSMUST00000224135 1557 ntBASIC14.16□□□□□ -0.14
Nop53Q8BK35 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop53Q8BK35 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.16□□□□□ -0.14
Nop53Q8BK35 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nop53Q8BK35 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm44855-201ENSMUST00000205725 362 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gm17330-201ENSMUST00000221047 165 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.15□□□□□ -0.14
Nop53Q8BK35 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop53Q8BK35 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nop53Q8BK35 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.14□□□□□ -0.15
Nop53Q8BK35 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop53Q8BK35 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms