Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.59□□□□□ -0.39
Vrk1Q80X41 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Gm29396-201ENSMUST00000185659 716 ntBASIC12.59□□□□□ -0.39
Vrk1Q80X41 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Cts7-204ENSMUST00000225321 1257 ntBASIC12.59□□□□□ -0.39
Vrk1Q80X41 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Gm24526-201ENSMUST00000082921 158 ntBASIC12.59□□□□□ -0.39
Vrk1Q80X41 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.59□□□□□ -0.39
Vrk1Q80X41 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vrk1Q80X41 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vrk1Q80X41 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vrk1Q80X41 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.58□□□□□ -0.4
Vrk1Q80X41 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm6222-202ENSMUST00000182143 629 ntBASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm38341-201ENSMUST00000195357 515 ntBASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.58□□□□□ -0.4
Vrk1Q80X41 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm10608-202ENSMUST00000213924 676 ntBASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.58□□□□□ -0.4
Vrk1Q80X41 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vrk1Q80X41 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.57□□□□□ -0.4
Vrk1Q80X41 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.57□□□□□ -0.4
Vrk1Q80X41 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gm45865-201ENSMUST00000211815 945 ntBASIC12.57□□□□□ -0.4
Vrk1Q80X41 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.57□□□□□ -0.4
Vrk1Q80X41 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.57□□□□□ -0.4
Vrk1Q80X41 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vrk1Q80X41 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms