Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gm8652-201ENSMUST00000181363 964 ntBASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gm28693-202ENSMUST00000190758 331 ntBASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpp38Q80UU2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.15□□□□□ -0.3
Rpp38Q80UU2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gm8810-201ENSMUST00000172895 754 ntBASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpp38Q80UU2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Rpp38Q80UU2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Rpp38Q80UU2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Rpp38Q80UU2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Gm37922-201ENSMUST00000195596 455 ntBASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Gm6458-201ENSMUST00000211573 635 ntBASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Gm5035-201ENSMUST00000215581 927 ntBASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpp38Q80UU2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms