Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ShbQ6PD21 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ShbQ6PD21 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.04□□□□□ -0.16
ShbQ6PD21 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.04□□□□□ -0.16
ShbQ6PD21 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ShbQ6PD21 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.04□□□□□ -0.16
ShbQ6PD21 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ShbQ6PD21 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShbQ6PD21 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Gm15881-201ENSMUST00000148792 942 ntBASIC14.03□□□□□ -0.16
ShbQ6PD21 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.03□□□□□ -0.16
ShbQ6PD21 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ShbQ6PD21 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.03□□□□□ -0.16
ShbQ6PD21 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.03□□□□□ -0.16
ShbQ6PD21 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ShbQ6PD21 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ShbQ6PD21 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ShbQ6PD21 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.03□□□□□ -0.16
ShbQ6PD21 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShbQ6PD21 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.02□□□□□ -0.16
ShbQ6PD21 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.02□□□□□ -0.16
ShbQ6PD21 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShbQ6PD21 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ShbQ6PD21 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ShbQ6PD21 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.02□□□□□ -0.17
ShbQ6PD21 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ShbQ6PD21 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.02□□□□□ -0.17
ShbQ6PD21 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Mir339-201ENSMUST00000083659 96 ntBASIC14.02□□□□□ -0.17
ShbQ6PD21 Gm25517-201ENSMUST00000083865 134 ntBASIC14.02□□□□□ -0.17
ShbQ6PD21 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ShbQ6PD21 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShbQ6PD21 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.01□□□□□ -0.17
ShbQ6PD21 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.01□□□□□ -0.17
ShbQ6PD21 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.01□□□□□ -0.17
ShbQ6PD21 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ShbQ6PD21 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ShbQ6PD21 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShbQ6PD21 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms