Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.69□□□□□ -0.54
Sqstm1Q64337 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm9727-201ENSMUST00000161387 555 ntBASIC11.69□□□□□ -0.54
Sqstm1Q64337 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sqstm1Q64337 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.68□□□□□ -0.54
Sqstm1Q64337 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.68□□□□□ -0.54
Sqstm1Q64337 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.68□□□□□ -0.54
Sqstm1Q64337 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sqstm1Q64337 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.67□□□□□ -0.54
Sqstm1Q64337 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Daam2-202ENSMUST00000224595 1926 ntBASIC11.67□□□□□ -0.54
Sqstm1Q64337 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sqstm1Q64337 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms