Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cln3Q61124 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cln3Q61124 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cln3Q61124 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cln3Q61124 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.38□□□□□ -0.11
Cln3Q61124 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.38□□□□□ -0.11
Cln3Q61124 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cln3Q61124 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cln3Q61124 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cln3Q61124 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.38□□□□□ -0.11
Cln3Q61124 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cln3Q61124 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cln3Q61124 Gm11439-201ENSMUST00000118598 409 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.37□□□□□ -0.11
Cln3Q61124 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Cln3Q61124 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 Gm8099-201ENSMUST00000200510 742 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.37□□□□□ -0.11
Cln3Q61124 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cln3Q61124 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
Cln3Q61124 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.37□□□□□ -0.11
Cln3Q61124 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cln3Q61124 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cln3Q61124 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.36□□□□□ -0.11
Cln3Q61124 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cln3Q61124 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.36□□□□□ -0.11
Cln3Q61124 Gm11930-201ENSMUST00000117788 190 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 Gm12176-201ENSMUST00000121420 875 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 Gm15276-201ENSMUST00000145953 498 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.36□□□□□ -0.11
Cln3Q61124 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Mir7221-201ENSMUST00000184009 72 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cln3Q61124 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.36□□□□□ -0.11
Cln3Q61124 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cln3Q61124 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.36□□□□□ -0.11
Cln3Q61124 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.36□□□□□ -0.11
Cln3Q61124 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cln3Q61124 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.35□□□□□ -0.11
Cln3Q61124 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cln3Q61124 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms