Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.67□□□□□ -0.38
Col12a1Q60847 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col12a1Q60847 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Gm23771-201ENSMUST00000178702 110 ntBASIC12.67□□□□□ -0.38
Col12a1Q60847 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.67□□□□□ -0.38
Col12a1Q60847 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.67□□□□□ -0.38
Col12a1Q60847 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.67□□□□□ -0.38
Col12a1Q60847 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.67□□□□□ -0.38
Col12a1Q60847 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.67□□□□□ -0.38
Col12a1Q60847 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm44158-201ENSMUST00000203881 505 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm13492-201ENSMUST00000119772 665 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm25881-201ENSMUST00000157783 103 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm45925-201ENSMUST00000218882 744 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.66□□□□□ -0.38
Col12a1Q60847 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm7851-201ENSMUST00000117574 323 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm13182-201ENSMUST00000122241 312 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm22144-201ENSMUST00000157402 102 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Mir1956-201ENSMUST00000157748 65 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm42657-201ENSMUST00000201746 211 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.66□□□□□ -0.38
Col12a1Q60847 Gm39404-201ENSMUST00000216350 313 ntBASIC12.66□□□□□ -0.38
Col12a1Q60847 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col12a1Q60847 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.65□□□□□ -0.38
Col12a1Q60847 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col12a1Q60847 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col12a1Q60847 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms