Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scn2bQ56A07 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.04□□□□□ -0.32
Scn2bQ56A07 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.04□□□□□ -0.32
Scn2bQ56A07 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.04□□□□□ -0.32
Scn2bQ56A07 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scn2bQ56A07 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gm12859-201ENSMUST00000117834 427 ntBASIC13.03□□□□□ -0.32
Scn2bQ56A07 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gm5161-201ENSMUST00000075243 853 ntBASIC13.03□□□□□ -0.32
Scn2bQ56A07 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.03□□□□□ -0.32
Scn2bQ56A07 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn2bQ56A07 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn2bQ56A07 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Gm43094-201ENSMUST00000196549 921 ntBASIC13.02□□□□□ -0.33
Scn2bQ56A07 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.02□□□□□ -0.33
Scn2bQ56A07 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.02□□□□□ -0.33
Scn2bQ56A07 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Scn2bQ56A07 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms