Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm37922-201ENSMUST00000195596 455 ntBASIC16.31■□□□□ 0.2
Usp48Q3V0C5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm10146-201ENSMUST00000072739 309 ntBASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.3■□□□□ 0.2
Usp48Q3V0C5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp48Q3V0C5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Mir698-201ENSMUST00000102164 109 ntBASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm6222-202ENSMUST00000182143 629 ntBASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp48Q3V0C5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp48Q3V0C5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms