Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Gm10752-201ENSMUST00000218348 729 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Ntng1-201ENSMUST00000051253 327 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Gm10179-201ENSMUST00000086233 688 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Gm9540-201ENSMUST00000188230 478 ntBASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Gm8285-201ENSMUST00000208293 759 ntBASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Fam196aQ3USH1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Gm12058-201ENSMUST00000118614 437 ntBASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Rprl1-202ENSMUST00000198476 238 ntBASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fam196aQ3USH1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.17□□□□□ -0.3
Fam196aQ3USH1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms