Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Col5a2Q3U962 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.4■□□□□ 0.06
Col5a2Q3U962 Gm8365-201ENSMUST00000197334 648 ntBASIC15.4■□□□□ 0.06
Col5a2Q3U962 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.4■□□□□ 0.06
Col5a2Q3U962 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Gm43916-201ENSMUST00000205062 967 ntBASIC15.4■□□□□ 0.06
Col5a2Q3U962 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a2Q3U962 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.39■□□□□ 0.05
Col5a2Q3U962 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.39■□□□□ 0.05
Col5a2Q3U962 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 AY036118-201ENSMUST00000200021 923 ntBASIC15.39■□□□□ 0.05
Col5a2Q3U962 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.39■□□□□ 0.05
Col5a2Q3U962 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.39■□□□□ 0.05
Col5a2Q3U962 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.39■□□□□ 0.05
Col5a2Q3U962 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.39■□□□□ 0.05
Col5a2Q3U962 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a2Q3U962 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.38■□□□□ 0.05
Col5a2Q3U962 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.38■□□□□ 0.05
Col5a2Q3U962 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Gm23949-201ENSMUST00000104027 127 ntBASIC15.38■□□□□ 0.05
Col5a2Q3U962 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.38■□□□□ 0.05
Col5a2Q3U962 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms