Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Gm10478-201ENSMUST00000084451 396 ntBASIC13.15□□□□□ -0.3
Col6a2Q02788 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col6a2Q02788 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.15□□□□□ -0.31
Col6a2Q02788 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Col6a2Q02788 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Col6a2Q02788 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.14□□□□□ -0.31
Col6a2Q02788 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm23931-201ENSMUST00000103842 109 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm7029-201ENSMUST00000173226 450 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm6458-201ENSMUST00000211573 635 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a2Q02788 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a2Q02788 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.14□□□□□ -0.31
Col6a2Q02788 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a2Q02788 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col6a2Q02788 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col6a2Q02788 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.13□□□□□ -0.31
Col6a2Q02788 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a2Q02788 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.13□□□□□ -0.31
Col6a2Q02788 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col6a2Q02788 Gm5187-201ENSMUST00000117317 991 ntBASIC13.13□□□□□ -0.31
Col6a2Q02788 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.13□□□□□ -0.31
Col6a2Q02788 Gm27514-201ENSMUST00000183692 110 ntBASIC13.13□□□□□ -0.31
Col6a2Q02788 Gm42693-201ENSMUST00000196779 631 ntBASIC13.13□□□□□ -0.31
Col6a2Q02788 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.13□□□□□ -0.31
Col6a2Q02788 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col6a2Q02788 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.13□□□□□ -0.31
Col6a2Q02788 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col6a2Q02788 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.12□□□□□ -0.31
Col6a2Q02788 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Col6a2Q02788 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.12□□□□□ -0.31
Col6a2Q02788 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col6a2Q02788 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col6a2Q02788 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms