Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Npas1P97459 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Npas1P97459 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.05□□□□□ -0.64
Npas1P97459 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.05□□□□□ -0.64
Npas1P97459 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Gm18737-201ENSMUST00000173594 937 ntBASIC11.05□□□□□ -0.64
Npas1P97459 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.05□□□□□ -0.64
Npas1P97459 AA619741-201ENSMUST00000195095 646 ntBASIC11.05□□□□□ -0.64
Npas1P97459 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.05□□□□□ -0.64
Npas1P97459 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.05□□□□□ -0.64
Npas1P97459 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.05□□□□□ -0.64
Npas1P97459 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.05□□□□□ -0.64
Npas1P97459 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Npas1P97459 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.04□□□□□ -0.64
Npas1P97459 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Npas1P97459 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Npas1P97459 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.04□□□□□ -0.64
Npas1P97459 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.04□□□□□ -0.64
Npas1P97459 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Npas1P97459 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.04□□□□□ -0.64
Npas1P97459 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.04□□□□□ -0.64
Npas1P97459 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Gm45612-201ENSMUST00000211320 160 ntBASIC11.04□□□□□ -0.64
Npas1P97459 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.04□□□□□ -0.64
Npas1P97459 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Npas1P97459 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Npas1P97459 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms