Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdh11P55288 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh11P55288 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.03□□□□□ -0.48
Cdh11P55288 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh11P55288 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Cdh11P55288 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh11P55288 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh11P55288 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh11P55288 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdh11P55288 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Gm5425-201ENSMUST00000214125 459 ntBASIC12.03□□□□□ -0.48
Cdh11P55288 Gm19220-201ENSMUST00000222682 803 ntBASIC12.03□□□□□ -0.48
Cdh11P55288 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh11P55288 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh11P55288 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cdh11P55288 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh11P55288 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh11P55288 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh11P55288 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh11P55288 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh11P55288 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.02□□□□□ -0.48
Cdh11P55288 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh11P55288 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cdh11P55288 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.02□□□□□ -0.49
Cdh11P55288 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdh11P55288 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdh11P55288 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Cdh11P55288 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdh11P55288 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdh11P55288 Gm4804-201ENSMUST00000182234 999 ntBASIC12.02□□□□□ -0.49
Cdh11P55288 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.02□□□□□ -0.49
Cdh11P55288 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh11P55288 Gm37714-201ENSMUST00000194742 342 ntBASIC12.02□□□□□ -0.49
Cdh11P55288 Gm18018-201ENSMUST00000198273 408 ntBASIC12.02□□□□□ -0.49
Cdh11P55288 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdh11P55288 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Gm6180-201ENSMUST00000065243 498 ntBASIC12.02□□□□□ -0.49
Cdh11P55288 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh11P55288 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Cdh11P55288 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cdh11P55288 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh11P55288 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh11P55288 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.01□□□□□ -0.49
Cdh11P55288 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdh11P55288 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh11P55288 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms