Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox1P53783 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sox1P53783 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox1P53783 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Rprl1-202ENSMUST00000198476 238 ntBASIC13.4□□□□□ -0.26
Sox1P53783 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.4□□□□□ -0.26
Sox1P53783 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.4□□□□□ -0.26
Sox1P53783 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox1P53783 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.4□□□□□ -0.26
Sox1P53783 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox1P53783 Gm8325-201ENSMUST00000099086 453 ntBASIC13.4□□□□□ -0.26
Sox1P53783 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sox1P53783 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox1P53783 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox1P53783 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox1P53783 Gm15515-201ENSMUST00000117827 822 ntBASIC13.39□□□□□ -0.27
Sox1P53783 Gm23218-201ENSMUST00000158124 276 ntBASIC13.39□□□□□ -0.27
Sox1P53783 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox1P53783 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox1P53783 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox1P53783 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox1P53783 Gm5904-201ENSMUST00000210286 865 ntBASIC13.39□□□□□ -0.27
Sox1P53783 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox1P53783 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.39□□□□□ -0.27
Sox1P53783 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox1P53783 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
Sox1P53783 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox1P53783 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox1P53783 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox1P53783 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Sox1P53783 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Gm11801-201ENSMUST00000117807 746 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Gm12948-201ENSMUST00000119406 682 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.38□□□□□ -0.27
Sox1P53783 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Sox1P53783 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.38□□□□□ -0.27
Sox1P53783 Gm43610-201ENSMUST00000199117 365 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Gm45550-201ENSMUST00000209380 946 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.38□□□□□ -0.27
Sox1P53783 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.38□□□□□ -0.27
Sox1P53783 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.38□□□□□ -0.27
Sox1P53783 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox1P53783 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox1P53783 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.38□□□□□ -0.27
Sox1P53783 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox1P53783 Carlr-201ENSMUST00000181515 2574 ntBASIC13.37□□□□□ -0.27
Sox1P53783 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox1P53783 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox1P53783 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox1P53783 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox1P53783 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.37□□□□□ -0.27
Sox1P53783 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms