Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.82□□□□□ -0.2
Rfx2P48379 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rfx2P48379 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.82□□□□□ -0.2
Rfx2P48379 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rfx2P48379 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Gm8810-201ENSMUST00000172895 754 ntBASIC13.81□□□□□ -0.2
Rfx2P48379 Proscos-202ENSMUST00000178990 666 ntBASIC13.81□□□□□ -0.2
Rfx2P48379 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.81□□□□□ -0.2
Rfx2P48379 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Gm6007-201ENSMUST00000208170 823 ntBASIC13.81□□□□□ -0.2
Rfx2P48379 Gm8598-201ENSMUST00000221184 836 ntBASIC13.81□□□□□ -0.2
Rfx2P48379 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.81□□□□□ -0.2
Rfx2P48379 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Gm16372-201ENSMUST00000073088 450 ntBASIC13.81□□□□□ -0.2
Rfx2P48379 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rfx2P48379 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx2P48379 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfx2P48379 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm12403-201ENSMUST00000121384 959 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Rfx2P48379 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Rfx2P48379 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx2P48379 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx2P48379 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.8□□□□□ -0.2
Rfx2P48379 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx2P48379 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx2P48379 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx2P48379 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx2P48379 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms