Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 Gm11618-201ENSMUST00000117946 267 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Gm10012-201ENSMUST00000078252 192 ntBASIC12.07□□□□□ -0.48
Nkx2-2P42586 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-2P42586 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.06□□□□□ -0.48
Nkx2-2P42586 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.06□□□□□ -0.48
Nkx2-2P42586 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.06□□□□□ -0.48
Nkx2-2P42586 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.06□□□□□ -0.48
Nkx2-2P42586 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-2P42586 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.05□□□□□ -0.48
Nkx2-2P42586 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm11803-201ENSMUST00000119966 444 ntBASIC12.05□□□□□ -0.48
Nkx2-2P42586 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.05□□□□□ -0.48
Nkx2-2P42586 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms